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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs13392872 chr2:73713072 G/A 7.29E-5 110 37.63 46.6 32.7 KM Plot
THYM rs1403284 chr2:73726662 A/G 3.87E-8 113 34.83 46.6 36.77 KM Plot
THYM rs141734026 chr8:82711420 AT/A 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs145381255 chr2:73629177 TGA/T 7.81E-8 108 37.63 46.23 34.83 KM Plot
THYM rs1465423 chr16:24772680 C/G 4.28E-5 113 50.1 30.03 46.6 KM Plot
THYM rs147691672 chr7:76130832 G/C 2.57E-5 112 39.5 45.87 25.83 KM Plot
THYM rs150174515 chr10:101301881 C/T 0 110 39.75 59.63 0.13 KM Plot
THYM rs1511377 chr3:140980454 G/A 1.9E-10 111 16.65 46.6 38.58 KM Plot
THYM rs1569413 chr22:45756081 A/G 4.9E-5 113 38.58 46.48 41.77 KM Plot
THYM rs1636632 chr7:76144483 A/G 3.38E-5 109 41.77 45.87 25.83 KM Plot
THYM rs16909651 chr8:82727569 T/C 4.45E-5 113 42.82 35.77 22.5 KM Plot
THYM rs16909729 chr8:82792942 G/A 4.72E-5 113 42.73 36.4 22.5 KM Plot
THYM rs17855260 chr7:76132898 T/C 3.08E-5 110 39.5 46.6 25.83 KM Plot
THYM rs1799211 chr7:76240677 G/T 8.51E-5 113 38.33 49.5 24.87 KM Plot
THYM rs1808307 chr7:76139115 T/A 2.35E-5 113 40.67 45.87 25.83 KM Plot